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Pulmonary Disease Projects


Project: Cystic Fibrosis

Terry Flotte, M.D.

Most individuals with cystic fibrosis (CF) suffer from a particular form of chronic obstructive lung disease characterized by endobronchial infection with Pseudomonas aeruginosa and other bacterial pathogens and an exaggerated inflammatory response to those pathogens, that leads over time to bronchiectasis and respiratory failure. At a molecular level, CF is due to defects in CFTR, a cAMP-regulated chloride channel. CFTR likely plays an important role in controlling the bulk flow and/or ionic composition of airway surface liquid (ASL). Changes in the ASL and in the mucus layer that sits right above it on the airway surface could predispose CF patients to airway infection and/or obstruction. There is increasing evidence to indicate, however, that patients with CF also have an exaggerated inflammatory response as well, perhaps as a primary consequence of CFTR mutations. A recent study from the Prince laboratory (7) has indicated that cells from CF patients have increased NF-B activation, which leads to increased secretion of pro-inflammatory cytokines, such as IL-8 and decreased secretion of anti-inflammatory cytokines, such as IL-10. This in turn results in a massive influx of neutrophils into the airways with subsequent alteration of airway function and structure. We hypothesize that this pathway plays a crucial role both in the pathogenesis of CF lung disease and in creating a barrier to viral vector-mediated CFTR gene transfer in the airways of affected individuals. We propose to test these hypotheses by (1) evaluating the role of anti-inflammatory and/or anti-protease therapy as a prelude to AAV-CFTR gene therapy and (2) determining whether CF lung disease can be ameliorated by the controlled expression of anti-inflammatory molecules from rAAV vectors. IL-10 expression will be investigated as a multi-functional anti-inflammatory in preclinical models of CF lung disease as a potential future anti-inflammatory gene therapy. This will be accomplished in the context of the following specific aims:

Specific Aim 1. The ongoing phase I trial of AAV-CFTR gene therapy in adult CF patients will be modified to evaluate the role of anti-inflammatory pretreatment as a means to improve gene transfer efficiency. Selected cohorts of adult CF patients receiving the tgAAVCF vector via fiberoptic bronchoscopy would either (1) undergo a pretreatment protocol consisting of intravenous antibiotics, airway clearance maneuvers, and anti-inflammatory steroids, (2) undergo a similar regimen with the addition of aerosolized AAT, or (3) receive the gene transfer vector without any pretreatment

Specific Aim 2. As an initial means of developing anti-inflammatory gene therapy, rAAV vectors expressing IL-10 under the control of a tetracycline-controlled transciptional activator system will be constructed and tested in vitro.
The commercially available Tet-Off system (22) (Clontech, Palo Alto, CA) will be evaluated in the context of rAAV-IL-10 vectors. In this system, IL-10 will be under the control of a minimal promoter engineered to contain a series of tetracycline responsive elements (TRE) in a rAAV backbone. A second gene expressing the tetracycline transactivator (tTA) will also be engineered into rAAV. The ability of the tTA protein to activate IL-10 transcription in the absence of doxycycline will be evaluated.

Specific Aim 3. Repressible and constitutively active rAAV-IL10 vectors will be evaluated in vivo in the lungs of IL-10 deficient mice. The safety, efficiency, and stability of expression over a 1-year interval following intratracheal injection will be examined. The optimal dosage of the rAAV vectors (including the tTA-expressing vectors in the case of the TRE-constructs) will be evaluated in terms of the safety and efficiency of expression. The ability of doxycycline to maintain repression will also be assessed in the context of rAAV-TRE-IL-10/rAAV-tTA gene transfer. And the ability of rAAV-IL10 to control the exaggerated inflammatory response seen in Pseudomonas-infected IL-10 knock-out mice will also be investigated.

Specific Aim 4. Once the optimal dosages of rAAV are defined, we will evaluate the ability of rAAV-derived IL-10 to ameliorate the lung disease phenotype of the Pseudomonas-infected CFTR knockout mice. The effects of rAAV-IL-10 expression will be tested with respect to the release of pro-inflammatory cytokines, the degree of neutrophil influx, the stunting of weight gain, and the overall mortality in this model of CF lung disease.

Our ultimate goal is to bring into clinical trials those anti-inflammatory therapies that appear to be the safest and most effective. It is difficult to determine at this time whether this type of anti-inflammatory therapy would be used as a prelude to AAV-CFTR gene therapy in patients with more advanced CF lung disease or as a stand-alone therapy to retard the progression of inflammatory lung damage.

Project: Alpha-1-antitrypsin Deficiency

Terry Flotte, M.D.

Alpha 1-antitrypsin (AAT) deficiency (A1AD) is characterized by a marked decrease in the circulating levels of the major serum antiprotease, AAT, with a subsequent compromise of pulmonary elastin resulting in a susceptibility to emphysema. The most common AAT mutation associated with this disease, the PI*Z allele (Glu342Lys), accounts for approximately 95% of cases. A minority of AAT deficient individuals will also develop a liver disease which is characterized by polymerization of the Z-form of AAT (Z-AT) within the endoplasmic reticulum (ER) of hepatocytes, which triggers hepatocellular injury, and ultimately cirrhosis. While the pulmonary disease associated with AAT deficiency can be treated by replacing serum levels of the protein up to a known threshold (11 M), the proximate goals of therapy for A1AD liver disease are less clear. Since the pathology appears to relate to a gain-of-function by the abnormal protein, down-regulation of expression of the mutant endogenous alleles might be considered. However, heterozygotes appear much less susceptible to disease than PI*Z homozygotes, which may indicate either a protective effect of the wild-type (PiM) version of the protein or a gene dosage effect. Futhermore, recent reports indicate that chemical chaperones, such as 4-phenylbutyric acid (4-PBA), can assist the proper folding of Z-AT, perhaps suggesting that an alternate therapeutic approach by augmenting chaperone function at a molecular level. The goal of this application is to sort out these various therapeutic options using recombinant AAV vectors that can stably insert therapeutic molecules without significant toxicity. This will be accomplished in the following specific aims:

Aim 1: To utilize gene transfer vectors in order to define cellular endpoints for therapy of A1AD-liver disease. Our hypothesis is that a 50% decrease in Z-AT by rAAV-ribozyme vectors will be sufficient to prevent cellular pathology due to Z-AT polymerization. We will confirm this by treating stably transfected CHO cell lines that constitutively express Z-AT with transcriptionally-controlled anti-AAT ribozymes already in use in our laboratory. The endpoints for these studies will be ER polymerization and accumulation of Z-AT as judged by EM and immunofluorescent staining combined with confocal microscopy. The potential need for augmentation with PiM AAT (M-AT) in facilitating this correction will also be examined.

Aim 2: To define the role of augmenting Hsp70 function as therapy for conformational disease. Previous studies with chemical chaperones suggest that augmentation of Hsp70 with rAAV-Hsp70 vectors will increase folding of mutant AAT and CFTR in a native configuration and facilitate degradation of the misfolded protein. In the case of the Z-AT-expressing CHO cell lines, this should result in an increase in secretion of the mutant protein into the supernatant media, as well as correction of the accumulation of mutant protein in the ER.

Aim 3: To evaluate the potential roles for rAAV-hAAT, rAAV-Hsp70, and rAAV-Rz, vectors to ameliorate liver pathology in mouse models. In a companion NIDDK-sponsored program, our laboratory has been actively working to increase the efficiency of rAAV-mediated transduction of hepatocytes in vivo as a potential means to deliver therapeutic molecules in the context of A1AD liver disease. In this final aim, we will combine those molecular strategies that appear most fruitful in the cell culture models with those vector improvements that result in the greatest enhancement of rAAV-mediated transduction. The resultant vectors will be used in one of two kinds of models: (1) a Z-AT overexpressing transgenic mouse model that has previously been published; or (2) mice that are stably expressing human AAT from previous portal vein injection of rAAV-hAAT vectors. The former model will be useful for all three therapies, while the latter will only be useful for ribozyme experiments.